PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN37086.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 268aa    MW: 30500.2 Da    PI: 5.3891
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN37086.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.51.5e-10161208455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +hn +Er RR +iN+++  L+ ++P +     k +s a +L + ++Y++sLq
  KHN37086.1 161 SHNLAERVRRGKINEKLRYLQNIVPGC----YKTMSMAVMLDEIINYVQSLQ 208
                 8*************************9....466*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.56E-11155212No hitNo description
SuperFamilySSF474593.93E-17155224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.0E-16157218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.377157207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.0E-7161208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.1E-9163213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MAEFTENLQN ISSSSPFLDI DPSMELLNQF IGMNQLYVLD NSNLMPYFSC DTFLGPQEPE  60
FPGNLEEDFP FLFHHVNHNA PPVSLPIFQA ENEIHEGNKR KSMDLLETSF ANSTSAVSET  120
GSKIKHSSGR GKRLKNNVTE EEEKAKEVVN ARARRGQATD SHNLAERVRR GKINEKLRYL  180
QNIVPGCYKT MSMAVMLDEI INYVQSLQHQ VEFLSLELTA ASTFYDFNSE IDAFETMQRS  240
RAYEAKELGK YKREGHGGVS LLQPTWHL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0312560.0KT031256.1 Glycine max clone HN_CCL_43 bHLH transcription factor (Glyma07g10311.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003550247.10.0PREDICTED: transcription factor BEE 1-like
SwissprotQ8GZ131e-56BEE1_ARATH; Transcription factor BEE 1
TrEMBLA0A0B2RRL60.0A0A0B2RRL6_GLYSO; Transcription factor BEE 1
STRINGGLYMA17G34010.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33603467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18400.12e-53BR enhanced expression 1
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]